Name: [Hs04233619_s1] [FOXN3-AS1]
Creator: Thermo Fisher Scientific
Keywords: [FOXN3-AS1] Assay, [FOXN3 antisense RNA 1] Assay

Assay Details

Gene Symbol: FOXN3-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036500.1		2	852		74
GenBank mRNA	BC067103.1	-	2	852		74

Interrogated Sequence		Translated Protein	Exon Boundary	Transcript Location	Amplicon Length
GenBankmRNA	AW470244.1	-	1	Chr. 14 - 89419360 - 89419792 [-] on Build GRCh38	74
GenBankmRNA	BE670350.1	-	1	Chr. 14 - 89419413 - 89419797 [-] on Build GRCh38	74
GenBankmRNA	BE348395.1	-	1	Chr. 14 - 89419413 - 89419797 [-] on Build GRCh38	74

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	tetratricopeptide repeat domain 8	TTC8	BBS8, RP51	-541.2kb	Sense	Chr. 14 - 88824153 - 88877996 on NCBI Build GRCh38
Downstream	FOXN3 antisense RNA 2	FOXN3-AS2	PRO1768	156.4kb	Sense	Chr. 14 - 89576216 - 89577477 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400007925.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000544.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P306720	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	25299	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	12718	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P306720	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P306720	-	-
Agilent Human 1B Microarray G4111A	A_32_P371708	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	227887_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	227885_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	229652_PM_s_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	NR_036500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	NR_036500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400007925.hg.1	NR_036500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14006667.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14006667.hg.1	NR_036500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14006667.hg.1	TC14000544.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR14006666.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14006666.hg.1	NR_036500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14006666.hg.1	TC14000544.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1400156143.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156143.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156143.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156143.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156143.hg.1	TC1400007925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1400156144.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156144.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156144.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156144.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156144.hg.1	TC1400007925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1400156145.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156145.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156145.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400156145.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400156145.hg.1	TC1400007925.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	ENST00000555562.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	NR_036500.1	Refseq
Affymetrix Human Clariom D Assay	TC1400007925.hg.1	NR_036500.1	Refseq
Human Genome U133 Plus 2.0 Array	227887_PM_at	-	-
Human Genome U133 Plus 2.0 Array	227885_PM_at	-	-
Human Genome U133 Plus 2.0 Array	229652_PM_s_at	-	-
Human Genome U133 Plus 2.0 Array	229652_s_at	-	-
Human Genome U133 Plus 2.0 Array	227885_at	-	-
Human Genome U133 Plus 2.0 Array	227887_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227885_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	227887_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	229652_s_at3	-	-
Human Genome U95 Set	74995_at	-	-
Human Genome U95 Set	74995_PM_at	-	-
Human Genome U95 Set	78385_at	-	-
Human Genome U95 Set	78385_PM_at	-	-
Human Genome U133 Set	229652_PM_s_at	-	-
Human Genome U133 Set	227887_at	-	-
Human Genome U133 Set	229652_s_at	-	-
Human Genome U133 Set	227887_PM_at	-	-
Human Genome U133 Set	227885_PM_at	-	-
Human Genome U133 Set	227885_at	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1806892	NR_036500.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1806892	BC067103.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1806892	NR_036500.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1806892	BC067103.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1806892	NR_036500.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1806892	BC067103.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1806892	NR_036500.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1806892	BC067103.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1806892	NR_036500.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1806892	BC067103.1	human_transcriptome

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Catalog #	4426961
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System Message

Genomic Map