Assay Details

Gene Symbol: MIR646
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_030376.1		1	45		87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC729296	LOC729296		-207.1kb	Sense	Chr. 20 - 60087686 - 60101387 on NCBI Build GRCh38
Downstream	uncharacterized LOC101928048	LOC101928048		161.0kb	Anti-sense	Chr. 20 - 60469609 - 60472976 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC2000007950.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix Illumina

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000007950.hg.1	ENST00000385067.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007950.hg.1	NR_030376.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155386.hg.1	ENST00000385067.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155386.hg.1	NR_030376.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000155386.hg.1	TC2000007950.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000155386.hg.1	ENST00000385067.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000155386.hg.1	NR_030376.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007950.hg.1	ENST00000385067.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007950.hg.1	NR_030376.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309574	NR_030376.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309574	NR_030376.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309574	NR_030376.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309574	NR_030376.1	human_transcriptome

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System Message

Genomic Map