Name: [Hs04273838_g1] [TFAP2A-AS1]
Creator: Thermo Fisher Scientific
Keywords: [TFAP2A-AS1] Assay, [TFAP2A antisense RNA 1] Assay

Assay Details

Gene Symbol: TFAP2A-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033910.1		2 - 3	422		108
GenBank mRNA	AK092393.1	-	1 - 2	986		108
GenBank mRNA	BC012200.1	-	1 - 2	475		108

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BF805798.1	-			Chr. - - [-] on Build	108
GenBankmRNA	AA234211.1	-	1 - 2	71	Chr. 6 - 10414982 - 10415637 [+] on Build GRCh38	108
GenBankmRNA	BM727389.1	-	1 - 2	83	Chr. 6 - 10414970 - 10415574 [+] on Build GRCh38	108
GenBankmRNA	AA255503.1	-	1 - 2	152	Chr. 6 - 10414900 - 10415414 [+] on Build GRCh38	108
GenBankmRNA	BF308436.1	-		423	Chr. - - [-] on Build	108
GenBankmRNA	BF036556.1	-		456	Chr. - - [-] on Build	108
GenBankmRNA	AA453692.1	-	1 - 2	153	Chr. 6 - 10414900 - 10415411 [+] on Build GRCh38	108
GenBankmRNA	AA235184.1	-	1 - 2	85	Chr. 6 - 10414968 - 10415601 [+] on Build GRCh38	108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	orofacial cleft 1 candidate 1	OFCC1	MRDS1	-572.1kb	Anti-sense	Chr. 6 - 9775808 - 9842630 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 518	LINC00518	C6orf218	11.6kb	Anti-sense	Chr. 6 - 10427785 - 10434822 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600006914.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000069.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8116832	-	-
Affymetrix Human Gene 1.0 ST Array	8116834	-	-
Affymetrix Human Gene 1.0 ST Array	8123874	-	-
Affymetrix Human Gene 1.0 ST Array	8116833	-	-
Affymetrix Human Gene 1.0 ST Array	8123875	-	-
Affymetrix Human Gene 1.1 ST Array	8116831	-	-
Affymetrix HT HG-U133+ PM Array Plate	1560503_PM_a_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR06000643.hg.1	TC06000069.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06000643.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000643.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000643.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06000644.hg.1	TC06000069.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06000644.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000644.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000644.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06000647.hg.1	TC06000069.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06000647.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000647.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06000645.hg.1	TC06000069.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06000645.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000645.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000645.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06000646.hg.1	TC06000069.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06000646.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06000646.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600147258.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147258.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600147258.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147258.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600147258.hg.1	TC0600006914.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600147257.hg.1	TC0600006914.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000420777.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	ENST00000443546.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	NR_033910.1	Refseq
Affymetrix Human Clariom D Assay	TC0600006914.hg.1	NR_033910.1	Refseq
Human Genome U133 Plus 2.0 Array	1557070_at	-	-
Human Genome U133 Plus 2.0 Array	1560503_a_at	-	-
Human Genome U133 Plus 2.0 Array	1557070_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1560503_PM_a_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557070_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560503_a_at2	-	-
Human Genome U95 Set	47125_PM_at	-	-
Human Genome U95 Set	47125_at	-	-

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3390471	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	50847	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3390471	-	-
Agilent Human 1B Microarray G4111A	A_32_P60160	-	-

System Message

Genomic Map