Name: [Hs04274458_m1] [LINC01289]
Creator: Thermo Fisher Scientific
Keywords: [LINC01289] Assay, [long intergenic non-protein coding RNA 1289] Assay

Assay Details

Gene Symbol: LINC01289
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038875.2		2 - 3	2884		81
GenBank mRNA	BC037345.2	-	2 - 3	2884		81

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC102724612	LOC102724612		-303.0kb	Sense	Chr. 8 - 63465849 - 63475482 on NCBI Build GRCh38
Downstream	uncharacterized LOC102724623	LOC102724623		71.4kb	Anti-sense	Chr. 8 - 63856943 - 64368558 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800012304.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000429.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171134	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454236	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454160	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454148	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454230	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454159	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454185	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454223	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171070	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454250	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171028	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171107	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171053	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171117	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454238	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454235	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454205	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454198	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454162	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454233	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171084	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171153	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454202	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454204	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454151	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454208	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454146	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454251	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171063	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454165	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454194	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454212	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171104	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454197	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454157	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454244	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454237	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454220	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454225	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454181	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454240	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454209	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454232	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454203	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454257	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454222	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454245	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171037	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454188	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454156	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454173	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171058	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171147	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171064	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454167	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454227	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454228	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454164	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454246	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171149	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454153	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171136	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454219	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454138	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171077	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454214	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454207	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171042	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454200	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454226	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171079	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454142	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454187	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454206	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454186	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454247	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171157	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454229	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454234	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171071	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171123	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171080	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454168	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454147	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454155	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454169	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454199	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171059	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454179	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171032	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454152	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171109	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454231	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454158	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454145	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454196	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454211	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06171026	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454150	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454172	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454221	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454189	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26454262	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	954174	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	629791	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	969163	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	157411	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	273251	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	22141	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	232117	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	92109	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	29403	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	71371	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	309287	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	278073	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	160736	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	335586	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3503990	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	37278	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3503990	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3503990	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	15474	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P38422944	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18330284	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18330289	-	-
Agilent Human 1B Microarray G4111A	A_32_P713116	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P18330289	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	1560337_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR08005961.hg.1	TC08000429.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08005961.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08005961.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185381.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185381.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185381.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185381.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185381.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800185382.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185382.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185382.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185382.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185382.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Human Genome U133 Plus 2.0 Array	1560337_at	-	-
Human Genome U133 Plus 2.0 Array	1560337_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1560337_at7	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A036653	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A036653	-	-

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Catalog #	4426961
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Genomic Map