Name: [Hs04274835_s1] [LOC392364]
Creator: Thermo Fisher Scientific
Keywords: [LOC392364] Assay, [nuclear pore associated protein 1 pseudogene] Assay

Assay Details

Gene Symbol: LOC392364
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040117.1		1	919		108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC497256	LOC497256		-10.3kb	Sense	Chr. 9 - 87844517 - 87939244 on NCBI Build GRCh38
Downstream	SPATA31 subfamily E member 1	SPATA31E1	C9orf79, FAM75E1	23.8kb	Anti-sense	Chr. 9 - 87882857 - 87888899 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900010658.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001302.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236702	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801034	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801018	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141043	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141057	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141030	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141053	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141060	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236705	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141040	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141031	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141061	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141046	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141033	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801000	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141039	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801007	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236704	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06800992	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06800997	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801025	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141035	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801022	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236711	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141020	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141051	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141048	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236710	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801030	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06800996	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141050	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141042	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141055	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141037	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236709	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801011	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P16236701	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141049	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141054	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06800994	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141052	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27141045	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06800993	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P06801001	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	19278	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	46726	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3293082	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3375762	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8162192	-	-
Affymetrix Human Gene 1.0 ST Array	8162193	-	-
Affymetrix Human Gene 1.1 ST Array	8162191	-	-
Affymetrix Human Transcriptome Array 2.0	PSR09016293.hg.1	TC09001302.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09016293.hg.1	NR_040117.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09016292.hg.1	TC09001302.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09016292.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09016292.hg.1	NR_040117.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09016294.hg.1	TC09001302.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09016294.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09016294.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172705.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172705.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172705.hg.1	TC0900010658.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900172706.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172706.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172706.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172706.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172706.hg.1	TC0900010658.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900172707.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172707.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172707.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172707.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172707.hg.1	TC0900010658.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900172704.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172704.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172704.hg.1	ENST00000399186.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900172704.hg.1	NR_040117.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900172704.hg.1	TC0900010658.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1730590	BC086877.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1730590	NR_040117.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1750317	-	-
Illumina human-6 v2.0 expression beadchip	ILMN_1750317	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1730590	BC086877.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1730590	NR_040117.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1730590	BC086877.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1730590	NR_040117.1	human_transcriptome

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Catalog #	4426961
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System Message

Genomic Map