Name: [Hs04275509_sH] [LOC100129138]
Creator: Thermo Fisher Scientific
Keywords: [LOC100129138] Assay, [THAP domain containing, apoptosis associated protein 3 pseudogene] Assay

Assay Details

Gene Symbol: LOC100129138
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033990.1		1	623		84

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BM449602.1	-	1	692		Chr. 1 - 104072987 - 104073944 [+] on Build GRCh38	86
GenBankmRNA	DB065785.1	-	1	374		Chr. 1 - 104073272 - 104073842 [+] on Build GRCh38	84

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	amylase, alpha 1C (salivary)	AMY1C	AMY1	-314.3kb	Sense	Chr. 1 - 103745430 - 103758692 on NCBI Build GRCh38
Downstream	uncharacterized LOC101928476	LOC101928476		1.5mb	Anti-sense	Chr. 1 - 105589694 - 105618935 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018250.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000922.hg.1

Set Membership:

Amplicon length between 71 and 85

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15093913	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459235	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459231	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459241	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459242	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459238	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428026	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459226	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428016	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15093902	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15093912	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428028	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459253	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459178	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428043	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459250	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428004	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428029	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459179	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459211	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459259	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459195	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459197	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459182	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459267	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459224	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459212	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428064	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459280	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459183	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459209	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459191	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459201	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00427971	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459200	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459181	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459254	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459233	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459223	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459266	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428006	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459186	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428054	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459281	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428000	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459258	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428042	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459230	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00427976	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459225	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459243	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459268	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459277	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459261	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459285	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00427993	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459244	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459284	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459257	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459177	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459194	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459247	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459283	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459234	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459175	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00427972	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00427991	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428017	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459180	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459271	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428001	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459256	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459275	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459264	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459199	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459278	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459251	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459255	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459205	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459202	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459187	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459269	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459210	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459192	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459239	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459203	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P20459248	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428053	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P00428060	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	614172	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	39350	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P280833	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	25364	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	44987	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P280833	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P280833	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P35252579	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15242503	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P35252584	-	-
Agilent Human 1B Microarray G4111A	A_32_P910283	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P15242503	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01014485.hg.1	TC01000922.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01014485.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01014485.hg.1	NR_033990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	ENST00000401022.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	NR_033990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	NR_033990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018250.hg.1	NR_033990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01014486.hg.1	TC01000922.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01014486.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01014486.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	ENST00000401022.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	ENST00000401022.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238459.hg.1	TC0100018250.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100238460.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238460.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238460.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238460.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238460.hg.1	TC0100018250.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100238461.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238461.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238461.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100238461.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100238461.hg.1	TC0100018250.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	ENST00000401022.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	ENST00000418362.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	NR_033990.1	Refseq
Affymetrix Human Clariom D Assay	TC0100018250.hg.1	NR_033990.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A026994	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A026994	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	234887	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3258046	NR_033990.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3258046	BC014218.2	human_transcriptome

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