Name: [Hs04332386_m1] [PCDH9-AS3]
Creator: Thermo Fisher Scientific
Keywords: [PCDH9-AS3] Assay, [PCDH9 antisense RNA 3] Assay

Assay Details

Gene Symbol: PCDH9-AS3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046636.1		1 - 2	142		151
GenBank mRNA	AI073488.1	-	2 - 3			151
GenBank mRNA	BX096806.1	-	1 - 2	141		151

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	PCDH9 antisense RNA 2	PCDH9-AS2		-62.4kb	Sense	Chr. 13 - 66825169 - 66915031 on NCBI Build GRCh38
Downstream	PCDH9 antisense RNA 4	PCDH9-AS4		12.4kb	Sense	Chr. 13 - 66990886 - 67002000 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300007410.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	TC1300007410.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150076.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150076.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150076.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150076.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150076.hg.1	TC1300007410.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1300150077.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150077.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150077.hg.1	ENST00000434073.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300150077.hg.1	NR_046636.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300150077.hg.1	TC1300007410.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map