Name: [Hs04402611_m1] [LINC00709]
Creator: Thermo Fisher Scientific
Keywords: [LINC00709] Assay, [long intergenic non-protein coding RNA 709] Assay

Assay Details

Gene Symbol: LINC00709
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_108039.1		1 - 2	250		98
GenBank mRNA	BX111793.1	-	1 - 2	250		98

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CR737742.1	-	1 - 2	217		Chr. 10 - 9275646 - 9286766 [+] on Build GRCh38	98
GenBankmRNA	CR741512.1	-	1 - 2	163		Chr. 10 - 9275700 - 9287113 [+] on Build GRCh38	98

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC105376398	LOC105376398		-681.2kb	Anti-sense	Chr. 10 - 8572747 - 8594391 on NCBI Build GRCh38
Downstream	uncharacterized LOC101928298	LOC101928298		771.7kb	Sense	Chr. 10 - 10058722 - 10063502 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000006733.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1000006733.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006733.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146125.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000146125.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146125.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000146125.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146125.hg.1	TC1000006733.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000146126.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000146126.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146126.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000146126.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146126.hg.1	TC1000006733.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1000006733.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006733.hg.1	ENST00000458168.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	TC1000006733.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146124.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146124.hg.1	NR_108039.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000146124.hg.1	TC1000006733.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map