Name: [Hs04404472_g1] [RTCA-AS1]
Creator: Thermo Fisher Scientific
Keywords: [RTCA-AS1] Assay, [RTCA antisense RNA 1] Assay

Assay Details

Gene Symbol: RTCA-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110434.1		2 - 3	270		140
GenBank mRNA	DA695476.1	-	2 - 3	221		140

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA455048.1	-	2 - 3	245	Chr. 1 - 100264974 - 100266147 [-] on Build GRCh38	140
GenBankmRNA	AL711488.1	-	2 - 3	225	Chr. 1 - 100263884 - 100266122 [-] on Build GRCh38	140
GenBankmRNA	BX954255.1	-	2 - 3	213	Chr. 1 - 100264760 - 100266116 [-] on Build GRCh38	140

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	dihydrolipoamide branched chain transacylase E2	DBT	BCATE2, BCKAD-E2, BCKADE2, BCOADC-E2, E2, E2B	-14.9kb	Sense	Chr. 1 - 100186922 - 100249864 on NCBI Build GRCh38
Downstream	RNA 3'-terminal phosphate cyclase	RTCA	RPC, RTC1, RTCD1	241.0	Anti-sense	Chr. 1 - 100266158 - 100292769 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015062.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212224.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212224.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212224.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212224.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212224.hg.1	TC0100015062.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100212223.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212223.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212223.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212223.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212223.hg.1	TC0100015062.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100212225.hg.1	TC0100015062.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	ENST00000421185.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110434.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015062.hg.1	NR_110435.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map