Name: [Hs04406680_m1] [FOCAD-AS1]
Creator: Thermo Fisher Scientific
Keywords: [FOCAD-AS1] Assay, [FOCAD antisense RNA 1] Assay

Assay Details

Gene Symbol: FOCAD-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121601.1		1 - 2	182		100
GenBank mRNA	BX115825.1	-	1 - 2	182		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	F21658.1	-	2	161		Chr. 12 - 52233244 - 52248917 [+] on Build GRCh38	100
GenBankmRNA	AI288976.1	-	1 - 2			Chr. 9 - 20683304 - 20684688 [+] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	focadhesin	FOCAD	KIAA1797		Anti-sense	Chr. 9 - 20658309 - 20995955 on NCBI Build GRCh38
Downstream	microRNA 491	MIR491	MIRN491, hsa-mir-491, mir-491	31.4kb	Anti-sense	Chr. 9 - 20716105 - 20716188 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900009682.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166250.hg.1	TC0900009682.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900166252.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166252.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166252.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166252.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166252.hg.1	TC0900009682.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	ENST00000445051.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009682.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166249.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166249.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166249.hg.1	ENST00000439876.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166249.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166249.hg.1	TC0900009682.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900166253.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166253.hg.1	NR_121601.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166253.hg.1	TC0900009682.hg.1	Clariom D TC

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System Message

Genomic Map