Name: [Hs04407223_m1] [LINC01612]
Creator: Thermo Fisher Scientific
Keywords: [LINC01612] Assay, [long intergenic non-protein coding RNA 1612] Assay

Assay Details

Gene Symbol: LINC01612
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125889.1		2 - 3	280		102
GenBank mRNA	CB163075.1	-	2 - 3	272		102

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CK823081.1	-	2 - 3	261	Chr. 4 - 170226610 - 170283079 [+] on Build GRCh38	102
GenBankmRNA	BF593281.1	-	1 - 2		Chr. 4 - 170273919 - 170283034 [-] on Build GRCh38	102
GenBankmRNA	BF029192.1	-	2 - 3	259	Chr. 4 - 170226609 - 170283039 [+] on Build GRCh38	102
GenBankmRNA	AW271746.1	-	1 - 2		Chr. 4 - 170226713 - 170283033 [-] on Build GRCh38	102
GenBankmRNA	BQ101048.1	-	2 - 3	261	Chr. 4 - 170226610 - 170283061 [+] on Build GRCh38	102

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	aminoadipate aminotransferase	AADAT	KAT2, KATII, KYAT2	-184.9kb	Anti-sense	Chr. 4 - 170060222 - 170091699 on NCBI Build GRCh38
Downstream	heat shock protein 90 alpha family class A member 6, pseudogene	HSP90AA6P	HSP90Af	321.0kb	Anti-sense	Chr. 4 - 170604715 - 170605458 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400009300.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163813.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163813.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163813.hg.1	TC0400009300.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009300.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163812.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400163812.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163812.hg.1	ENST00000504509.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400163812.hg.1	NR_125889.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400163812.hg.1	TC0400009300.hg.1	Clariom D TC

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System Message

Genomic Map