Name: [Hs04408168_s1] [LINC01311]
Creator: Thermo Fisher Scientific
Keywords: [LINC01311] Assay, [long intergenic non-protein coding RNA 1311] Assay

Assay Details

Gene Symbol: LINC01311
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_103767.1		1	1024		125
GenBank mRNA	AB593110.1	-	1	1015		125
GenBank mRNA	BU621681.1	-	1			125

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX409986.2	-	1	130		Chr. 22 - 19172599 - 19172832 [+] on Build GRCh38	125

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	goosecoid homeobox 2	GSC2	GSCL	-21.4kb	Anti-sense	Chr. 22 - 19148991 - 19150283 on NCBI Build GRCh38
Downstream	solute carrier family 25 member 1	SLC25A1	CTP, D2L2AD, SEA, SLC20A3	2.7kb	Anti-sense	Chr. 22 - 19175575 - 19178863 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200006590.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2200006590.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200006590.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200006590.hg.1	NR_103767.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200145116.hg.1	TC2200006590.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200145116.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200145116.hg.1	NR_103767.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200145116.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200145116.hg.1	NR_103767.1	Refseq
Affymetrix Human Clariom D Assay	TC2200006590.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200006590.hg.1	ENST00000565162.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200006590.hg.1	NR_103767.1	Refseq

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System Message

Genomic Map