Name: [Hs04408602_s1] [LINC01099]
Creator: Thermo Fisher Scientific
Keywords: [LINC01099] Assay, [long intergenic non-protein coding RNA 1099] Assay

Assay Details

Gene Symbol: LINC01099
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_108092.1		1	119		54
RefSeq	NR_108093.1		1	119		54
GenBank mRNA	BI439083.1	-	1	128		54
GenBank mRNA	BM504346.1	-	1	68		54

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BQ549903.1	-	1	68	Chr. 4 - 177812648 - 177907880 [-] on Build GRCh38	54
GenBankmRNA	CK905464.1	-	1	68	Chr. 4 - 177812627 - 177907880 [-] on Build GRCh38	54
GenBankmRNA	BQ581317.1	-	1	68	Chr. 4 - 177812616 - 177907880 [-] on Build GRCh38	54
GenBankmRNA	BQ267717.1	-	1	68	Chr. 4 - 177812677 - 177907880 [-] on Build GRCh38	54
GenBankmRNA	BU071468.1	-	1	52	Chr. 4 - 177729638 - 177907862 [-] on Build GRCh38	54

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 1098	LINC01098			Anti-sense	Chr. 4 - 177728757 - 177990750 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 290	LINC00290	NCRNA00290	3.2mb	Sense	Chr. 4 - 181064089 - 181159149 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400012502.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185709.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185709.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185709.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185709.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185709.hg.1	TC0400012502.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185712.hg.1	TC0400012502.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	TC0400012502.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185707.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185707.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185707.hg.1	TC0400012502.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400185708.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185708.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185708.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185708.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185708.hg.1	TC0400012502.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000507011.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000512527.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	ENST00000514736.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	NR_108092.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	NR_108093.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400185710.hg.1	TC0400012502.hg.1	Clariom D TC

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System Message

Genomic Map