Name: [Hs04415535_s1] [LOC100288798]
Creator: Thermo Fisher Scientific
Keywords: [LOC100288798] Assay, [uncharacterized LOC100288798] Assay

Assay Details

Gene Symbol: LOC100288798
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125377.1		4	562		71
	NR_125378.1		4	535		71
	NR_125379.1		4	515		71
	NR_125380.1		4	497		71
	NR_125381.1		3	422		71
GenBank mRNA	AI094227.1	-	1			71

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AW205546.1	-	1		Chr. 12 - 46387884 - 46652579 [-] on Build GRCh38	71
GenBankmRNA	AA825437.1	-	1		Chr. 12 - 46455010 - 46652575 [-] on Build GRCh38	71
GenBankmRNA	AJ706964.1	-	3	449	Chr. 12 - 46387777 - 46652577 [+] on Build GRCh38	71
GenBankmRNA	AA904189.1	-	1		Chr. 12 - 46470200 - 46652574 [-] on Build GRCh38	71
GenBankmRNA	BG187482.1	-	1		Chr. 12 - 46537502 - 46652568 [-] on Build GRCh38	71
GenBankmRNA	BG215047.1	-	1		Chr. 12 - 46650493 - 46652563 [-] on Build GRCh38	71
GenBankmRNA	BG190678.1	-	1	146	Chr. 12 - 46652385 - 46652579 [+] on Build GRCh38	71
GenBankmRNA	AJ346719.1	-	2	249	Chr. 12 - 46617571 - 46652563 [+] on Build GRCh38	71
GenBankmRNA	W86575.1	-	1		Chr. 12 - 46387889 - 46652571 [-] on Build GRCh38	71
GenBankmRNA	BG189634.1	-	1		Chr. 12 - 46537502 - 46652563 [-] on Build GRCh38	71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC102723757	LOC102723757		-278.6kb	Sense	Chr. 12 - 46372783 - 46373778 on NCBI Build GRCh38
Downstream	solute carrier family 38 member 4	SLC38A4	ATA3, NAT3, PAAT, SNAT4	112.2kb	Anti-sense	Chr. 12 - 46764761 - 46832422 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200012618.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551021.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	ENST00000607353.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125377.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125379.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125380.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012618.hg.1	NR_125381.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	ENST00000551503.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	NR_125378.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200199724.hg.1	TC1200012618.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map