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Gene Symbol:: Smg5
Gene Name:: Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
Gene Aliases:: BC024683, mKIAA1089
Chromosome Location:: Chr.3: 88336260 - 88362338 on Build GRCm38
Species:: Mouse
Species Specific ID (Flybase ID):: -

Assay ID

Mm00557483_m1

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Catalog #	4331182
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Genomic Map
Assay Details
More Information

Assay Details

Gene Symbol: Smg5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_178246.3	NP_839977.2	1 - 2	241		95
GenBank mRNA	AK129286.1	-	1 - 2	220		95
	AK143911.1	-	1 - 2	242		95
	AK155787.1	-	1 - 2	230		95
	BB869373.1	-	2 - 3	174		95
	BC024683.1	-	1 - 2	193	3992000	95
	BC100408.1	-	1 - 2	190	30734268	95

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000724.mm.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Recommended Assay

Mus musculus

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smg5

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300005096.mm.1	NM_178246.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005096.mm.1	NM_178246.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005096.mm.1	TC0300000724.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300005093.mm.1	NM_178246.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005093.mm.1	NM_178246.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005093.mm.1	TC0300000724.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300005095.mm.1	NM_178246.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005095.mm.1	NM_178246.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300005095.mm.1	TC0300000724.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	655480	-	-
ABI Mouse Genome Survey Microarray	758620	-	-