Name: [Mm01160337_m1] [2700054A10Rik]
Creator: Thermo Fisher Scientific
Keywords: [2700054A10Rik] Assay, [RIKEN cDNA 2700054A10 gene] Assay

Assay Details

Gene Symbol: 2700054A10Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045436.1		1 - 2	86		67
RefSeq	NR_045437.1		1 - 2	82		67
GenBank mRNA	AK012419.1	-		155		67
	AK137633.1	-		342		67
	BC068229.1	-		187		67

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CO429823.1	-	2 - 3	145	Chr. 17 - 13490690 - 13568822 [-] on Build GRCm38	67
GenBankmRNA	BY711558.1	-	2 - 3	152	Chr. 17 - 13490307 - 13761357 [-] on Build GRCm38	67
GenBankmRNA	BY741140.1	-	4 - 5	426	Chr. 17 - 13496610 - 13761403 [-] on Build GRCm38	67
GenBankmRNA	BY722878.1	-	3 - 4	342	Chr. 17 - 13496617 - 13668893 [-] on Build GRCm38	67
GenBankmRNA	CB244292.1	-	2 - 3	188	Chr. 17 - 13490634 - 13568864 [-] on Build GRCm38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	sperm motility kinase 4A	Smok4a	4930513D10Rik, Smok2c	-19.9kb	Anti-sense	Chr. 17 - 13521456 - 13528434 on NCBI Build GRCm38
Downstream	predicted gene 16046	Gm16046	OTTMUSG00000029502	125.2kb	Sense	Chr. 17 - 13679250 - 13685440 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700001473.mm.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Mus musculus

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700013160.mm.1	NR_045436.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013160.mm.1	NR_045436.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013160.mm.1	NR_045437.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013160.mm.1	NR_045437.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013160.mm.1	TC1700001473.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700013161.mm.1	NR_045436.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013161.mm.1	NR_045436.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013161.mm.1	NR_045437.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013161.mm.1	NR_045437.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013161.mm.1	TC1700001473.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700013158.mm.1	NR_045436.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013158.mm.1	NR_045436.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700013158.mm.1	TC1700001473.mm.1	MTA TC

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System Message

Genomic Map