Gm5485
Genomic Map
Back To TopAssay Details
| Gene Symbol: Gm5485 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_015373.1 | 3 - 4 | 217 | 67 | ||
| GenBank mRNA | AK078896.1 | - | 3 - 4 | 218 | 67 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | developmental pluripotency associated 2 | Dppa2 |
2410088E07Rik, C80932, D19Mgi18, ECAT15-2 |
-79.9kb | Anti-sense | Chr. 16 - 48310274 - 48319513 on NCBI Build GRCm38 |
| Downstream | microrchidia 1 | Morc1 | Morc | 29.6kb | Anti-sense | Chr. 16 - 48431237 - 48630905 on NCBI Build GRCm38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1600001687.mm.1Set Membership: |
Amplicon length less than or equal to 70
3' Most
Mus musculus
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_66_P121502 | NR_015373.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_66_P121502 | AK078896.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | BC006871.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | M63725.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | NM_007497.3 | refseq_mrna_mouse_NM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | XM_001474817.1 | refseq_mrna_mouse_XM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | XM_001478226.1 | refseq_mrna_mouse_XM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 903915 | XM_001479002.1 | refseq_mrna_mouse_XM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 225301 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 593644 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 280552 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 482438 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 572903 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 835450 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 498962 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 85133 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_66_P121502 | NR_015373.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_66_P121502 | AK078896.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P121502 | NR_015373.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P121502 | AK078896.1 | mouse_transcriptome |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740699 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12948163 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740685 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740692 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740668 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740649 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12940756 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740600 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740596 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740597 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12490909 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740665 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740633 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740659 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740593 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12555306 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12881831 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740680 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740624 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740590 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740628 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740676 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12807691 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740671 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740599 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740647 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12946036 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740629 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740646 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740642 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740661 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740644 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740645 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740587 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740690 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12555297 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12490911 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740589 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740637 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740641 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740677 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740654 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740679 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740693 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740683 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740657 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740595 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740630 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740631 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740708 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740652 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740687 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13007018 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740584 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12673216 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740669 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740622 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740640 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13007014 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740650 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740667 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740673 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740706 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12532775 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30740702 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT MG-430 PM Array Plate | 1441622_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1441622_at | - | - |
| Mouse Genome 430 2.0 Array | 1441622_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 433023_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 433023_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1600013790.mm.1 | NR_015373.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013790.mm.1 | NR_015373.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013790.mm.1 | TC1600001687.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1600013791.mm.1 | NR_015373.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013791.mm.1 | NR_015373.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013791.mm.1 | TC1600001687.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1600013792.mm.1 | NR_015373.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013792.mm.1 | NR_015373.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013792.mm.1 | TC1600001687.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1600013793.mm.1 | NR_015373.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013793.mm.1 | NR_015373.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1600013793.mm.1 | TC1600001687.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1441622_PM_at | - | - |
| Mouse Expression Set 430 | 1441622_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1441622_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1441622_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 481679 | - | - |
Back To Top