Name: [Mm01300828_m1] [A330009N23Rik]
Creator: Thermo Fisher Scientific
Keywords: [A330009N23Rik] Assay, [RIKEN cDNA A330009N23 gene] Assay

Assay Details

Gene Symbol: A330009N23Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045326.1		2 - 3	398		84
	NR_045327.1		2 - 3	319		84
	NR_045328.1		2 - 3	366		84
GenBank mRNA	AK038079.1	-	2 - 3	398		84
	AK039268.1	-	2 - 3	330		84
	BY254676.1	-	2 - 3	291		84

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BB633145.1	-	2 - 3	330	Chr. 15 - 101221855 - 101225150 [-] on Build GRCm38	84
GenBankmRNA	BG088654.2	-	1 - 2	153	Chr. 15 - 101221728 - 101223633 [-] on Build GRCm38	84
GenBankmRNA	BU524515.1	-		378	Chr. - - [-] on Build	84
GenBankmRNA	BI220933.1	-	1 - 2	149	Chr. 15 - 101221659 - 101223629 [-] on Build GRCm38	84
GenBankmRNA	BY724193.1	-	2 - 3	366	Chr. 15 - 101221896 - 101225186 [-] on Build GRCm38	84

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	activin A receptor, type 1B	Acvr1b	6820432J04, ActR-IB, ActRIB, Acvrlk4, Alk4, SKR2	-8.9kb	Anti-sense	Chr. 15 - 101174125 - 101212601 on NCBI Build GRCm38
Downstream	GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein	Grasp	tamalin	574.0	Anti-sense	Chr. 15 - 101224207 - 101232756 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002256.mm.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mus musculus

1700

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2278604	AK038079.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2278604	BB164247.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2278604	BG076127.2	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	527256	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	156963	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2278604	AK038079.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2278604	BB164247.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2278604	BG076127.2	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P03116384	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P123748	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_67_P03116384	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1435844_PM_at	-	-
Mouse Genome 430 2.0 Array	1435844_PM_at	-	-
Mouse Genome 430 2.0 Array	1435844_at	-	-
Affymetrix Mouse Clariom S Array	PSR1500018528.mm.1	NR_045327.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018528.mm.1	NR_045327.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018528.mm.1	TC1500002256.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045326.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045326.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045327.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045327.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045328.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	NR_045328.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018525.mm.1	TC1500002256.mm.1	MTA TC
Mouse Expression Set 430	1435844_PM_at	-	-
Mouse Expression Set 430	1435844_at	-	-
Affymetrix HT Mouse Genome 430B Array	1435844_at	-	-
Affymetrix HT Mouse Genome 430B Array	1435844_PM_at	-	-

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System Message

Genomic Map