Name: [Mm03455830_m1] [Ftx]
Creator: Thermo Fisher Scientific
Keywords: [Ftx] Assay, [Ftx transcript, Xist regulator (non-protein coding)] Assay

Assay Details

Gene Symbol: Ftx
Interrogated Sequence		Translated Protein	RNADB ID	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_028380.1			2 - 3	337		64
RefSeq	NR_028381.1			2 - 3	337		64
GenBank mRNA	AK020989.1	-	LIT1001 Ftx	2 - 3	204		64
	AK035525.1	-		2 - 3	339		64
	AK085125.1	-		2 - 3	224		64
	BC027389.1	-		1 - 2	133		64
	BC076616.1	-		2 - 3	246		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BB628053.1	-	2 - 3	339	Chr. X - 103609304 - 103623756 [-] on Build GRCm38	64
GenBankmRNA	BG920590.1	-	1 - 2	133	Chr. X - 103606955 - 103615193 [-] on Build GRCm38	64
GenBankmRNA	CN525891.1	-	2 - 3	246	Chr. X - 103607604 - 103623663 [-] on Build GRCm38	64
GenBankmRNA	BB660326.1	-	2 - 3	204	Chr. X - 103607647 - 103616934 [-] on Build GRCm38	64
GenBankmRNA	BY727089.1	-	2 - 3	202	Chr. X - 103607709 - 103622500 [-] on Build GRCm38	64
GenBankmRNA	CJ045781.1	-	2 - 3	317	Chr. X - 103613031 - 103623733 [-] on Build GRCm38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 374b	Mir374b	Mir374, Mirn374, mir-374b, mmu-mir-374, mmu-mir-374b	-39.9kb	Sense	Chr. X - 103573060 - 103573154 on NCBI Build GRCm38
Downstream	zinc finger, CCHC domain containing 13	Zcchc13	4930513O09Rik, Cnbp2	15.4kb	Anti-sense	Chr. X - 103630586 - 103631664 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002778.mm.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Mus musculus

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00017557.mm.1	NR_028380.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017557.mm.1	NR_028380.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017557.mm.1	NR_028381.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017557.mm.1	NR_028381.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017557.mm.1	TC0X00002778.mm.1	MTA TC

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System Message

Genomic Map