Name: [Mm03681946_m1] [Pdxk-ps]
Creator: Thermo Fisher Scientific
Keywords: [Pdxk-ps] Assay, [pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene] Assay

Assay Details

Gene Symbol: Pdxk-ps
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027316.1		1 - 2	1228		73
GenBank mRNA	AK138248.1	-	1 - 2	1228		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB659329.1	-	2 - 3	100		Chr. 17 - 32081328 - 32091423 [-] on Build GRCm38	73
GenBankmRNA	BY726324.1	-	2 - 3	323		Chr. 17 - 32078797 - 32107350 [-] on Build GRCm38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ribosomal RNA processing 1 homolog B (S. cerevisiae)	Rrp1b	2600005C20Rik, D030064A17, Kiaa0179, mKIAA0179	-24.9kb	Anti-sense	Chr. 17 - 32036162 - 32062865 on NCBI Build GRCm38
Downstream	predicted gene, 38585	Gm38585		22.5kb	Anti-sense	Chr. 17 - 32113924 - 32129237 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700001832.mm.1

Set Membership:

Amplicon length between 71 and 85

Mus musculus

Probe spans exons

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700016848.mm.1	NR_027316.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700016848.mm.1	TC1700001832.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700016851.mm.1	NR_027316.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700016851.mm.1	TC1700001832.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700016850.mm.1	NR_027316.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700016850.mm.1	TC1700001832.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700016849.mm.1	NR_027316.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700016849.mm.1	TC1700001832.mm.1	MTA TC

System Message

Genomic Map