Name: [Mm03948194_g1] [5830418P13Rik]
Creator: Thermo Fisher Scientific
Keywords: [5830418P13Rik] Assay, [RIKEN cDNA 5830418P13 gene] Assay

Assay Details

Gene Symbol: 5830418P13Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040466.1		2 - 3	290		95
GenBank mRNA	AK079871.1	-	1 - 2	143		95
GenBank mRNA	AK134047.1	-	2 - 3	291		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB636091.1	-	1 - 2	139		Chr. 9 - 103426676 - 103459907 [+] on Build GRCm38	95
GenBankmRNA	BY717817.1	-	2 - 3	291		Chr. 9 - 103423578 - 103428484 [+] on Build GRCm38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	beaded filament structural protein 2, phakinin	Bfsp2	AI448593, CP49		Anti-sense	Chr. 9 - 103424924 - 103480414 on NCBI Build GRCm38
Downstream	predicted gene 16252	Gm16252	OTTMUSG00000032743	44.7kb	Sense	Chr. 9 - 103472049 - 103503357 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900001304.mm.1

Set Membership:

Amplicon length between 86 and 100

Detect Genomic DNA

Mus musculus

1700

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900010168.mm.1	NR_040466.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010168.mm.1	NR_040466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010168.mm.1	TC0900001304.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900010165.mm.1	NR_040466.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010165.mm.1	NR_040466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010165.mm.1	TC0900001304.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900010167.mm.1	NR_040466.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010167.mm.1	NR_040466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900010167.mm.1	TC0900001304.mm.1	MTA TC

System Message

Genomic Map