Name: [Mm04278443_m1] [3300005D01Rik]
Creator: Thermo Fisher Scientific
Keywords: [3300005D01Rik] Assay, [RIKEN cDNA 3300005D01 gene] Assay

Assay Details

Gene Symbol: 3300005D01Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045080.1		1 - 2	502		63
GenBank mRNA	AK019455.1	-	1 - 2	341		63

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AV172257.1	-	1 - 2	113		Chr. 17 - 5799877 - 5802896 [+] on Build GRCm38	63
GenBankmRNA	BY713361.1	-	1 - 2	338		Chr. 17 - 5799654 - 5802897 [+] on Build GRCm38	63

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	zinc finger, DHHC domain containing 14	Zdhhc14	B530001K09Rik, New1cp	-45.6kb	Sense	Chr. 17 - 5491946 - 5753891 on NCBI Build GRCm38
Downstream	sorting nexin 9	Snx9	2700073N08Rik, SDP1, SH3PX1	38.1kb	Sense	Chr. 17 - 5841380 - 5930711 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700000041.mm.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Mus musculus

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045079.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045079.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045080.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045080.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045081.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	NR_045081.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000218.mm.1	TC1700000041.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700000215.mm.1	NR_045079.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000215.mm.1	NR_045079.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000215.mm.1	NR_045080.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000215.mm.1	NR_045080.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000215.mm.1	TC1700000041.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700000216.mm.1	NR_045079.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000216.mm.1	NR_045079.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000216.mm.1	NR_045080.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000216.mm.1	NR_045080.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700000216.mm.1	TC1700000041.mm.1	MTA TC

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Genomic Map