Name: [Mm04410435_m1] [C430002N11Rik]
Creator: Thermo Fisher Scientific
Keywords: [C430002N11Rik] Assay, [RIKEN cDNA C430002N11 gene] Assay

Assay Details

Gene Symbol: C430002N11Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_102293.1		4 - 5	430		65
RefSeq	NR_102296.1		4 - 5	517		65
GenBank mRNA	AA030139.1	-	4 - 5	391		65
	AK049386.1	-	4 - 5	505		65
	AK089981.1	-		504		65

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA E030011O05 gene	E030011O05Rik		-18.7kb	Anti-sense	Chr. 9 - 96731575 - 96752831 on NCBI Build GRCm38
Downstream	2-phosphoxylose phosphatase 1	Pxylp1	9430094M07Rik, Acpl2, BB177120, C130099A20Rik	48.9kb	Anti-sense	Chr. 9 - 96823336 - 96892680 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900001218.mm.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2427150	AK049386.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2427150	BB407702.2	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	587165	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	277856	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	392808	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	865386	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	539778	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	953491	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	826058	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	118547	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	170655	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P135467	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2427150	AK049386.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2427150	BB407702.2	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P135467	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P02006245	-	-
Whole Mouse Genome G4122A	A_52_P239470	AK049386.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P115327	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P135467	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748992	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07870876	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748948	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07543508	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748985	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748924	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07839968	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748968	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748926	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748943	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748936	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748980	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748964	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748995	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748946	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08188632	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748928	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748951	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748944	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07947639	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748927	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748978	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748942	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748960	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748981	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748970	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748957	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748993	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748967	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748976	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748966	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07870877	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07839967	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748963	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08116735	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748930	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748940	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748987	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748988	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08116739	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748971	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748937	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748955	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748962	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748954	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26748974	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1440510_PM_at	-	-
Mouse Genome 430 2.0 Array	1440510_at	-	-
Mouse Genome 430 2.0 Array	1440510_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0900009587.mm.1	NR_102293.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009587.mm.1	NR_102296.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009587.mm.1	TC0900001218.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900009588.mm.1	NR_102293.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009588.mm.1	NR_102294.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009588.mm.1	NR_102295.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009588.mm.1	NR_102296.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900009588.mm.1	TC0900001218.mm.1	MTA TC
Mouse Expression Set 430	1440510_PM_at	-	-
Mouse Expression Set 430	1440510_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440510_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440510_at	-	-

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Genomic Map