000372

Assay Name:	ath-miR399a
miRBase Accession Number:	MI0001020
miRBase Version:	v22.1
Chromosome Location:	Chr.1: 10227073 - 10227195 [+] on Build TAIR10.1
Mature miRNA Sequence:	UGCCAAAGGAGAUUUGCCCUG
Species:	Arabidopsis, Arabidopsis lyrata, Cynara cardunculus, Glycine max, Gossypium hirsutum, Medicago truncatula
Product Type:	TaqMan^™ MicroRNA Assay

Assay Details

• Gene Family ID: MIPF0000015, MIR399

• Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG

Mature miRNA Details:

Species	miRBase ID	miRBase Accession Number
Arabidopsis	ath-miR399a	MIMAT0000951
Arabidopsis lyrata	aly-miR399f-3p	MIMAT0017582
Cynara cardunculus	cca-miR399	MIMAT0024533
Glycine max	gma-miR399j	MIMAT0041664
Glycine max	gma-miR399k	MIMAT0041672
Gossypium hirsutum	ghr-miR399d	MIMAT0014350
View More Rows
Medicago truncatula	mtr-miR399c	MIMAT0001650
Medicago truncatula	mtr-miR399h	MIMAT0011075
Medicago truncatula	mtr-miR399i	MIMAT0011076

Stem-loop Details

Arabidopsis

Stem-loop ID	ath-MIR399a
Stem-loop Accession #	MI0001020
Stem-loop Sequence	AAAUGCAUUACAGGGUAAGAUCUCUAUUGGCAGGAAACCAUUACUUAGAUCUUUGCAUCUCUUUAUGCAUUGCUUUUAAUUAGUGAGUUAUCUGCCAAAGGAGAUUUGCCCUGUAAUUCUUCU
Chromosome Location	Chr. 1 - 10227073 - 10227195 [+] on Build TAIR10.1
Mature MicroRNA	miRBase Accession #: MIMAT0000951 miRBase ID: ath-miR399a Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: Chr. 1 - 10227073 - 10227195 [+] on Build TAIR10.1

Arabidopsis lyrata

Stem-loop ID	aly-MIR399f
Stem-loop Accession #	MI0014593
Stem-loop Sequence	AUGAAAGAUACAUAGAGAAGGUGCAAAUACAUUACAGGGCAAGAUCACCAUUGGCAGAAAUCUAUUACUUCAUUCUUGCAUAAUAUGCAUUAAUGUUUGUGGUGAGCUCUCUGCCAAAGGAGAUUUGCCCUGUAAUUCUCUUGCGCCAAUGUUUUAGAUAUCUUCAU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0017582 miRBase ID: aly-miR399f-3p Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Cynara cardunculus

Stem-loop ID	cca-MIR399
Stem-loop Accession #	MI0021086
Stem-loop Sequence	GUAUUACUGGGCAAUUACUCUUUUAGCAGUUUGUAAGCAACAUGCUACCUCUAACUGCCAAAGGAGAUUUGCCCUGUAAUACA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0024533 miRBase ID: cca-miR399 Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Glycine max

Stem-loop ID	gma-MIR399j
Stem-loop Accession #	MI0033456
Stem-loop Sequence	UUGAGGAAUGAUAGAGCAAAUCUCCAGUGGCAGAGAGAAGUAGAGGGCUUGAACAUGCAUGCUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUUUUUUA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0041664 miRBase ID: gma-miR399j Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Stem-loop ID	gma-MIR399k
Stem-loop Accession #	MI0033464
Stem-loop Sequence	UUGAGGAAUGAUAGAGCAAAUCUCCAUUGGCAGUGGGAAGUAGAGGGCUUGAACAUGCAUGCUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUUUUUUA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0041672 miRBase ID: gma-miR399k Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Gossypium hirsutum

Stem-loop ID	ghr-MIR399d
Stem-loop Accession #	MI0013557
Stem-loop Sequence	UGAGGAAUUACAGGGCAACUCUCCUUAAGCAAAAAUGGAUGUGCUUUUCUUUGCAUAAUUCGAUUUUGCCAAAGGAGAUUUGCCCUGCCAUUCACUCA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0014350 miRBase ID: ghr-miR399d Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Medicago truncatula

Stem-loop ID	mtr-MIR399c
Stem-loop Accession #	MI0001748
Stem-loop Sequence	GUUCUGCUGUUGAGGAAUGAUAGGGAAAAUCUCUUUUGGCAGAGAGGAGUAAAAAUCUUAAACAGGAAUGUUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUUUUUGACAGCUAUUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0001650 miRBase ID: mtr-miR399c Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Stem-loop ID	mtr-MIR399h
Stem-loop Accession #	MI0005589
Stem-loop Sequence	AAUGAUAGAGCAAAUCUCUAUUGGCAGAACGAAGUAGAAAGCUUGGACAUGCAUGCUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0011075 miRBase ID: mtr-miR399h Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

Stem-loop ID	mtr-MIR399i
Stem-loop Accession #	MI0005590
Stem-loop Sequence	AAUGAUAGAGCAAAUCUCUAUUAGCAGAACGAAGUAGAAAGCUUGGACAUGCAUGCUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0011076 miRBase ID: mtr-miR399i Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCUG Chromosome Location: NA

More Information

Related Products

mirVana^® miRNA inhibitor : MH10918
mirVana^® miRNA mimic : MC10918

miRBase Alias:

Arabidopsis lyrata: aly-miR399f (v18)