Rn03465526_pri

• Assay Name: rno-mir-542-1
• Stem-loop ID: rno-mir-542-1 rno-mir-542-2 rno-mir-542-3
• Mapped to miRBase Version: v22.1
• Stem-loop Location: Chr.X: 158152146 - 158152224 [+] on Build Rnor_6.0 Chr.X: 158158885 - 158158963 [+] on Build Rnor_6.0 Chr.X: 158588529 - 158588607 [+] on Build Rnor_6.0
• Mature miRNA ID: rno-miR-542-5p rno-miR-542-3p
• Species: Rat
• Product Type: TaqMan^™ Pri-miRNA Assay

Assay Details

• Amplicon Length: 83
• Chromosome Location: Chr. X - 158588762 - 158588762 [-] on 158588762 Build Rnor_6.0
• Species: Rat

miRBase Details:

Species	miRBase ID	miRBase Accession Number
Rat	rno-miR-542-5p	MIMAT0003178
Rat	rno-miR-542-3p	MIMAT0003179

Stem-loop Details

Rat

Stem-loop ID	rno-mir-542-1
Stem-loop Accession #	MI0003528
Stem-loop Sequence	UCUCAGACGUCUCGGGGAUCAUCAUGUCACGAGAUACCACUGCGCACUUGUGACAGAUUGAUAACUGAAAGGUCUGGGA
Chromosome Location	Chr. X - 158152146 - 158152224 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003178 miRBase ID: rno-miR-542-5p Mature miRNA Sequence: CUCGGGGAUCAUCAUGUCACGA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003179 miRBase ID: rno-miR-542-3p Mature miRNA Sequence: UGUGACAGAUUGAUAACUGAAA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000185, mir-542
Distance to Amplicon	104 bases

Stem-loop ID	rno-mir-542-2
Stem-loop Accession #	MI0031781
Stem-loop Sequence	UCUCAGACGUCUCGGGGAUCAUCAUGUCACGAGAUACCACUGCGCACUUGUGACAGAUUGAUAACUGAAAGGUCUGGGA
Chromosome Location	Chr. X - 158158885 - 158158963 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003178 miRBase ID: rno-miR-542-5p Mature miRNA Sequence: CUCGGGGAUCAUCAUGUCACGA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003179 miRBase ID: rno-miR-542-3p Mature miRNA Sequence: UGUGACAGAUUGAUAACUGAAA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000185, mir-542
Distance to Amplicon	104 bases

Stem-loop ID	rno-mir-542-3
Stem-loop Accession #	MI0031782
Stem-loop Sequence	UCUCAGACGUCUCGGGGAUCAUCAUGUCACGAGAUACCACUGCGCACUUGUGACAGAUUGAUAACUGAAAGGUCUGGGA
Chromosome Location	Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003178 miRBase ID: rno-miR-542-5p Mature miRNA Sequence: CUCGGGGAUCAUCAUGUCACGA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003179 miRBase ID: rno-miR-542-3p Mature miRNA Sequence: UGUGACAGAUUGAUAACUGAAA Chromosome Location: Chr. X - 158588529 - 158588607 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000185, mir-542
Distance to Amplicon	104 bases

More Information

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miRBase Alias:

Rat: rno-mir-542-1 (v21)