Rn00569225_m1 Best Coverage

• Gene Symbol: Sftpc
• Gene Name: surfactant protein C
• Gene Aliases: SP-C
• Chromosome Location: Chr.15: 52211538 - 52214480 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sftpc
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017342.2	NP_059038.1	1 - 2	57		78
GenBank mRNA	BC072693.1	-	1 - 2	50	7099876	78
	X14221.1	-	1 - 2	58		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1500001997.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sftpc

Panther Classification:

Molecular Function -

surfactant

Gene Ontology Categories:

Process(es)

respiratory gaseous exchange
circadian rhythm
response to hormone
response to glucose
response to organic substance
response to lipopolysaccharide
response to retinoic acid
response to vitamin A
regulation of liquid surface tension
protein homooligomerization
response to glucocorticoid
response to cAMP
response to hyperoxia
response to interleukin-6
response to growth factor
cellular response to mechanical stimulus
cellular response to nitric oxide

Function(s)

protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P536702	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861625	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	737249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	469681	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156236	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P536702	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P536702	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P536702	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P474867	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P536702	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700177901	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	71677	-	-
Agilent Rat cDNA Microarray (G4105A)	700177901	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10785095	-	-
Affymetrix Rat Gene 1.0 ST Array	10785092	-	-
Affymetrix Rat Gene 1.0 ST Array	10785094	-	-
Affymetrix Rat Gene 1.0 ST Array	10785093	-	-
Affymetrix Rat Gene 1.0 ST Array	10785091	-	-
Affymetrix Rat Gene 1.1 ST Array	10785090	-	-
Rat Genome 230 2.0 Array	1370255_PM_at	-	-
Rat Genome 230 2.0 Array	1370255_at	-	-
Affymetrix HT Rat Focus Array	1370255_at	-	-
Affymetrix HT Rat Focus Array	1370255_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1500013775.rn.1	TC1500001997.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500013773.rn.1	TC1500001997.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500013777.rn.1	TC1500001997.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10785090	-	-
Rat Genome U34 Set	X14221_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21249516	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362125	-	-
RatRef-12 Expression BeadChip	ILMN_54593	-	-